skyllh package
Subpackages
- skyllh.cluster package
- skyllh.core package
wd_filename()- Subpackages
- Submodules
- skyllh.core.analysis module
AnalysisAnalysis.src_hypo_group_managerAnalysis.src_fitparam_mapperAnalysis.test_statisticAnalysis.bkg_gen_methodAnalysis.dataset_listAnalysis.data_listAnalysis.n_datasetsAnalysis.fitparamsetAnalysis.llhratioAnalysis.bkg_generatorAnalysis.sig_generatorAnalysis.total_livetimeAnalysis.add_dataset()Analysis.calculate_test_statistic()Analysis.construct_llhratio()Analysis.construct_background_generator()Analysis.construct_signal_generator()Analysis.initialize_trial()Analysis.maximize_llhratio()Analysis.unblind()Analysis.generate_background_events()Analysis.generate_signal_events()Analysis.generate_pseudo_data()Analysis.do_trial_with_given_pseudo_data()Analysis.do_trial_with_given_bkg_and_sig_pseudo_data()Analysis.do_trial()Analysis.do_trials()
TimeIntegratedMultiDatasetSingleSourceAnalysisTimeIntegratedMultiDatasetSingleSourceAnalysis.fitparam_nsTimeIntegratedMultiDatasetSingleSourceAnalysis.add_dataset()TimeIntegratedMultiDatasetSingleSourceAnalysis.construct_llhratio()TimeIntegratedMultiDatasetSingleSourceAnalysis.change_source()TimeIntegratedMultiDatasetSingleSourceAnalysis.initialize_trial()TimeIntegratedMultiDatasetSingleSourceAnalysis.maximize_llhratio()TimeIntegratedMultiDatasetSingleSourceAnalysis.calculate_fluxmodel_scaling_factor()
- skyllh.core.analysis_utils module
pointlikesource_to_data_field_array()calculate_pval_from_trials()truncated_gamma_logpdf()calculate_critical_ts_from_gamma()polynomial_fit()estimate_mean_nsignal_for_ts_quantile()estimate_sensitivity()estimate_discovery_potential()generate_mu_of_p_spline_interpolation()create_trial_data_file()extend_trial_data_file()calculate_upper_limit_distribution()
- skyllh.core.background_generation module
BackgroundGenerationMethodMCDataSamplingBkgGenMethodMCDataSamplingBkgGenMethod.get_event_prob_funcMCDataSamplingBkgGenMethod.get_mean_funcMCDataSamplingBkgGenMethod.unique_eventsMCDataSamplingBkgGenMethod.data_scramblerMCDataSamplingBkgGenMethod.mc_inplace_scramblingMCDataSamplingBkgGenMethod.keep_mc_data_field_namesMCDataSamplingBkgGenMethod.pre_event_selection_methodMCDataSamplingBkgGenMethod.change_source_hypo_group_manager()MCDataSamplingBkgGenMethod.generate_events()
- skyllh.core.background_generator module
- skyllh.core.backgroundpdf module
- skyllh.core.binning module
- skyllh.core.config module
- skyllh.core.coords module
- skyllh.core.dataset module
DatasetDataset.get_combined_exp_pathfilenames()Dataset.get_combined_mc_pathfilenames()Dataset.get_combined_livetime()Dataset.nameDataset.descriptionDataset.exp_pathfilename_listDataset.exp_abs_pathfilename_listDataset.mc_pathfilename_listDataset.mc_abs_pathfilename_listDataset.livetimeDataset.versionDataset.verqualifiersDataset.base_pathDataset.default_sub_path_fmtDataset.sub_path_fmtDataset.root_dirDataset.loading_extra_exp_field_name_listDataset.loading_extra_mc_field_name_listDataset.exp_field_name_renaming_dictDataset.mc_field_name_renaming_dictDataset.existsDataset.version_strDataset.data_preparation_functionsDataset.__gt__()Dataset.get_abs_pathfilename_list()Dataset.update_version_qualifiers()Dataset.load_data()Dataset.load_aux_data()Dataset.add_data_preparation()Dataset.remove_data_preparation()Dataset.prepare_data()Dataset.load_and_prepare_data()Dataset.add_binning_definition()Dataset.get_binning_definition()Dataset.has_binning_definition()Dataset.define_binning()Dataset.replace_binning_definition()Dataset.add_aux_data_definition()Dataset.get_aux_data_definition()Dataset.add_aux_data()Dataset.get_aux_data()
DatasetCollectionDatasetCollection.nameDatasetCollection.descriptionDatasetCollection.dataset_namesDatasetCollection.versionDatasetCollection.verqualifiersDatasetCollection.__iadd__()DatasetCollection.add_datasets()DatasetCollection.remove_dataset()DatasetCollection.get_dataset()DatasetCollection.get_datasets()DatasetCollection.set_exp_field_name_renaming_dict()DatasetCollection.set_mc_field_name_renaming_dict()DatasetCollection.set_dataset_prop()DatasetCollection.define_binning()DatasetCollection.add_data_preparation()DatasetCollection.remove_data_preparation()DatasetCollection.update_version_qualifiers()DatasetCollection.load_data()
DatasetDataassert_data_format()remove_events()generate_data_file_root_dir()get_data_subset()
- skyllh.core.debugging module
- skyllh.core.detsigyield module
get_integrated_livetime_in_days()DetSigYieldDetSigYieldImplMethodDetSigYieldImplMethod.supported_sourcemodelsDetSigYieldImplMethod.supported_fluxmodelsDetSigYieldImplMethod.n_signal_fitparamsDetSigYieldImplMethod.signal_fitparam_namesDetSigYieldImplMethod.supports_sourcemodel()DetSigYieldImplMethod.supports_fluxmodel()DetSigYieldImplMethod.construct_detsigyield()DetSigYieldImplMethod.source_to_array()
- skyllh.core.display module
- skyllh.core.interpolate module
- skyllh.core.livetime module
LivetimeLivetime.assert_mjd_intervals_integrity()Livetime.uptime_mjd_intervals_arrLivetime.n_uptime_mjd_intervalsLivetime.livetimeLivetime.time_windowLivetime.time_startLivetime.time_endLivetime.load_from_ontime_mjd_intervals()Livetime.get_ontime_intervals_between()Livetime.get_ontime_upto()Livetime.is_on()Livetime.draw_ontimes()
- skyllh.core.llhratio module
LLHRatioTCLLHRatioSingleDatasetTCLLHRatioZeroSigH0SingleDatasetTCLLHRatioSingleSourceZeroSigH0SingleDatasetTCLLHRatioDatasetSignalWeightsSingleSourceDatasetSignalWeightsMultiDatasetTCLLHRatioMultiDatasetTCLLHRatio.dataset_signal_weightsMultiDatasetTCLLHRatio.llhratio_listMultiDatasetTCLLHRatio.n_selected_eventsMultiDatasetTCLLHRatio.mean_n_sig_0MultiDatasetTCLLHRatio.change_source_hypo_group_manager()MultiDatasetTCLLHRatio.initialize_for_new_trial()MultiDatasetTCLLHRatio.evaluate()MultiDatasetTCLLHRatio.calculate_ns_grad2()
NsProfileMultiDatasetTCLLHRatio
- skyllh.core.math module
- skyllh.core.minimizer module
- skyllh.core.model module
- skyllh.core.multiproc module
- skyllh.core.optimize module
- skyllh.core.parameters module
make_linear_parameter_grid_1d()make_params_hash()ParameterParameterSetParameterSet.union()ParameterSet.paramsParameterSet.fixed_paramsParameterSet.fixed_params_maskParameterSet.floating_paramsParameterSet.floating_params_maskParameterSet.n_paramsParameterSet.n_fixed_paramsParameterSet.n_floating_paramsParameterSet.fixed_param_name_listParameterSet.floating_param_name_listParameterSet.fixed_param_valuesParameterSet.floating_param_initialsParameterSet.floating_param_boundsParameterSet.__iter__()ParameterSet.__len__()ParameterSet.get_fixed_pidx()ParameterSet.get_floating_pidx()ParameterSet.has_fixed_param()ParameterSet.has_floating_param()ParameterSet.make_params_fixed()ParameterSet.make_params_floating()ParameterSet.update_fixed_param_value_cache()ParameterSet.copy()ParameterSet.add_param()ParameterSet.has_param()ParameterSet.floating_param_values_to_dict()
ParameterSetArrayParameterSetArray.paramset_listParameterSetArray.n_paramsParameterSetArray.n_fixed_paramsParameterSetArray.n_floating_paramsParameterSetArray.floating_param_initialsParameterSetArray.floating_param_boundsParameterSetArray.generate_random_initials()ParameterSetArray.split_floating_param_values()ParameterSetArray.update_fixed_param_value_cache()
ParameterGridParameterGrid.from_BinningDefinition()ParameterGrid.nameParameterGrid.decimalsParameterGrid.gridParameterGrid.deltaParameterGrid.lower_boundParameterGrid.ndimParameterGrid.add_extra_lower_and_upper_bin()ParameterGrid.copy()ParameterGrid.round_to_nearest_grid_point()ParameterGrid.round_to_lower_grid_point()ParameterGrid.round_to_upper_grid_point()
ParameterGridSetModelParameterMapperModelParameterMapper.nameModelParameterMapper.modelsModelParameterMapper.global_paramsetModelParameterMapper.n_modelsModelParameterMapper.n_global_paramsModelParameterMapper.n_global_fixed_paramsModelParameterMapper.n_global_floating_paramsModelParameterMapper.finalize()ModelParameterMapper.def_param()ModelParameterMapper.get_model_param_dict()
SingleModelParameterMapperMultiModelParameterMapperHypoParameterDefinitionFitParameterFitParameterSetFitParameterSet.fitparamsFitParameterSet.fitparam_listFitParameterSet.fitparam_name_listFitParameterSet.initialsFitParameterSet.boundsFitParameterSet.copy()FitParameterSet.add_fitparam()FitParameterSet.fitparam_values_to_dict()FitParameterSet.fitparam_dict_to_values()FitParameterSet.generate_random_initials()
SourceFitParameterMapperSingleSourceFitParameterMapperMultiSourceFitParameterMapper
- skyllh.core.pdf module
- skyllh.core.pdfratio module
PDFRatioSingleSourcePDFRatioArrayArithmeticSingleSourcePDFRatioArrayArithmetic.pdfratio_listSingleSourcePDFRatioArrayArithmetic.fitparam_listSingleSourcePDFRatioArrayArithmetic.initialize_for_new_trial()SingleSourcePDFRatioArrayArithmetic.get_pdfratio()SingleSourcePDFRatioArrayArithmetic.calculate_pdfratio_values()SingleSourcePDFRatioArrayArithmetic.get_ratio_product()
PDFRatioFillMethodSkylab2SkylabPDFRatioFillMethodMostSignalLikePDFRatioFillMethodMinBackgroundLikePDFRatioFillMethodSigOverBkgPDFRatioSpatialSigOverBkgPDFRatioSigSetOverBkgPDFRatio
- skyllh.core.progressbar module
ProgressBarProgressBar.maxvalProgressBar.startvalProgressBar.parentProgressBar.progressProgressBar.gets_shownProgressBar.add_sub_progress_bar()ProgressBar.remove_sub_progress_bar()ProgressBar.get_progress_list()ProgressBar.rerender()ProgressBar.trigger_rerendering()ProgressBar.start()ProgressBar.finish()ProgressBar.update()ProgressBar.increment()
- skyllh.core.py module
PyQualifierConstPyQualifiertypename()classname()get_byte_size_prefix()getsizeof()issequence()issequenceof()issequenceofsubclass()isproperty()func_has_n_args()bool_cast()int_cast()float_cast()str_cast()list_of_cast()get_smallest_numpy_int_type()get_number_of_float_decimals()ObjectCollectionNamedObjectCollection
- skyllh.core.random module
- skyllh.core.scrambling module
- skyllh.core.session module
- skyllh.core.signal_generation module
- skyllh.core.signal_generator module
- skyllh.core.signalpdf module
- skyllh.core.smoothing module
- skyllh.core.source_hypo_group module
- skyllh.core.source_hypothesis module
SourceHypoGroupManagerSourceHypoGroupManager.source_listSourceHypoGroupManager.n_sourcesSourceHypoGroupManager.n_src_hypo_groupsSourceHypoGroupManager.src_hypo_group_listSourceHypoGroupManager.add_source_hypo_group()SourceHypoGroupManager.get_fluxmodel_by_src_idx()SourceHypoGroupManager.get_detsigyield_implmethod_list_by_src_idx()
- skyllh.core.storage module
register_FileLoader()create_FileLoader()assert_file_exists()FileLoaderNPYFileLoaderPKLFileLoaderDataFieldRecordArrayDataFieldRecordArray.__contains__()DataFieldRecordArray.__getitem__()DataFieldRecordArray.__setitem__()DataFieldRecordArray.__len__()DataFieldRecordArray.__sizeof__()DataFieldRecordArray.field_name_listDataFieldRecordArray.indicesDataFieldRecordArray.append()DataFieldRecordArray.append_field()DataFieldRecordArray.as_numpy_record_array()DataFieldRecordArray.copy()DataFieldRecordArray.remove_field()DataFieldRecordArray.get_field_dtype()DataFieldRecordArray.set_field_dtype()DataFieldRecordArray.convert_dtypes()DataFieldRecordArray.get_selection()DataFieldRecordArray.set_selection()DataFieldRecordArray.rename_fields()DataFieldRecordArray.tidy_up()DataFieldRecordArray.sort_by_field()
- skyllh.core.test_statistic module
- skyllh.core.times module
- skyllh.core.timing module
- skyllh.core.trialdata module
DataFieldTrialDataManagerTrialDataManager.index_field_nameTrialDataManager.eventsTrialDataManager.n_eventsTrialDataManager.n_selected_eventsTrialDataManager.n_pure_bkg_eventsTrialDataManager.trial_data_state_idTrialDataManager.__contains__()TrialDataManager.change_source_hypo_group_manager()TrialDataManager.initialize_trial()TrialDataManager.add_source_data_field()TrialDataManager.add_data_field()TrialDataManager.calculate_source_data_fields()TrialDataManager.calculate_pre_evt_sel_static_data_fields()TrialDataManager.calculate_static_data_fields()TrialDataManager.calculate_fitparam_data_fields()TrialDataManager.get_data()TrialDataManager.get_dtype()
- skyllh.i3 package
- Subpackages
- Submodules
- skyllh.i3.background_generation module
- skyllh.i3.backgroundpdf module
- skyllh.i3.config module
- skyllh.i3.coords module
- skyllh.i3.dataset module
- skyllh.i3.detsigyield module
- skyllh.i3.livetime module
- skyllh.i3.pdf module
- skyllh.i3.pdfratio module
- skyllh.i3.scrambling module
- skyllh.i3.signal_generation module
- skyllh.i3.signalpdf module
- skyllh.physics package
- Submodules
- skyllh.physics.flux module
- skyllh.physics.flux_model module
FluxProfileSpatialFluxProfileUnitySpatialFluxProfilePointSpatialFluxProfileEnergyFluxProfileUnityEnergyFluxProfilePowerLawEnergyFluxProfileTimeFluxProfileUnityTimeFluxProfileBoxTimeFluxProfileGaussianTimeFluxProfileFluxModelFactorizedFluxModelFactorizedFluxModel.Phi0FactorizedFluxModel.spatial_profileFactorizedFluxModel.energy_profileFactorizedFluxModel.time_profileFactorizedFluxModel.math_function_strFactorizedFluxModel.angle_unitFactorizedFluxModel.energy_unitFactorizedFluxModel.time_unitFactorizedFluxModel.parameter_namesFactorizedFluxModel.__call__()FactorizedFluxModel.set_parameters()
IsPointlikeSourcePointlikeSourceFFMSteadyPointlikeSourceFFM
- skyllh.physics.model module
- skyllh.physics.source module
- skyllh.physics.time_profile module
- skyllh.plotting package
- skyllh.utils package